167 lines
3.7 KiB
Plaintext
167 lines
3.7 KiB
Plaintext
{
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"cells": [
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "9de5907f-18f5-4cb1-903e-26028ff1fa03",
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"metadata": {},
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"outputs": [],
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"source": [
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"import pandas as pd\n",
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"\n",
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"pd.set_option('display.max_rows', 100)\n",
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"pd.set_option('display.max_columns', None)\n",
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"\n",
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"from VAERSFileDownloader import updateVAERSFiles\n",
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"from datetime import datetime\n",
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"from DateProvider import DateProvider\n",
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"from InternationalVaersCovid19Provider import getInternationalVaersCovid19\n",
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"from BatchCodeTableHtmlUpdater import updateBatchCodeTableHtmlFile"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "d1e4fa9e",
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"metadata": {},
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"outputs": [],
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"source": [
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"print(datetime.now().strftime(\"%d.%m.%Y, %H:%M:%S Uhr\"))\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "ffad1c04",
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"metadata": {},
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"outputs": [],
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"source": [
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"dateProvider = DateProvider()\n",
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"print(' lastUpdated:', dateProvider.getLastUpdated())\n",
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"print('lastUpdatedDataSource:', dateProvider.getLastUpdatedDataSource()) \n",
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"needsUpdate = dateProvider.needsUpdate()\n",
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"print('needsUpdate:', needsUpdate)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "e673b947",
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"metadata": {},
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"outputs": [],
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"source": [
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"def getWorkingDirectory():\n",
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" pwd = ! \"pwd\"\n",
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" return pwd[0]"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "e313a06c",
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"metadata": {},
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"outputs": [],
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"source": [
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"getWorkingDirectory()"
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]
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},
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{
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"cell_type": "markdown",
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"id": "9514f5be",
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"metadata": {},
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"source": [
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"## Download VAERS-Data"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "a793dff0",
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"metadata": {},
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"outputs": [],
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"source": [
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"updateVAERSFiles(needsUpdate, getWorkingDirectory())"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "781ac80e",
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"metadata": {},
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"outputs": [],
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"source": [
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"internationalVaersCovid19 = getInternationalVaersCovid19(years = [2020, 2021, 2022])\n",
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"internationalVaersCovid19"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "8d6507ca",
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"metadata": {},
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"outputs": [],
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"source": [
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"updateBatchCodeTableHtmlFile(internationalVaersCovid19, batchCodeTableHtmlFile=\"../docs/batchCodeTable.html\")"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "8de69f66",
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"metadata": {},
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"outputs": [],
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"source": [
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"def publishGitHubPages():\n",
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" %cd /home/frankknoll/Dokumente/Corona/projects/HowBadIsMyBatch-pages\n",
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" ! git add -A\n",
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" ! git commit -m \"updating data for batch codes\"\n",
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" ! git push"
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]
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},
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{
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"cell_type": "markdown",
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"id": "3c7319f3",
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"metadata": {},
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"source": [
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"### see https://knollfrank.github.io/HowBadIsMyBatch/batchCodeTable.html"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "865df645",
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"metadata": {},
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"outputs": [],
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"source": [
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"publishGitHubPages()"
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]
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}
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],
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"metadata": {
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"kernelspec": {
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"display_name": "Python 3.10.7 64-bit",
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"language": "python",
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"name": "python3"
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},
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"language_info": {
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"codemirror_mode": {
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"name": "ipython",
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"version": 3
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},
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"file_extension": ".py",
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"mimetype": "text/x-python",
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.10.7"
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},
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"vscode": {
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"interpreter": {
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"hash": "916dbcbb3f70747c44a77c7bcd40155683ae19c65e1c03b4aa3499c5328201f1"
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}
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}
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},
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"nbformat": 4,
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"nbformat_minor": 5
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}
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