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refactoring

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frankknoll
2022-01-31 20:14:51 +01:00
parent bf1269b578
commit 440e078869
1 changed files with 9 additions and 13 deletions
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22
HowBadIsMyBatch.ipynb
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@@ -34,22 +34,17 @@
" dataFrames = map(createDataFrameFromDescr, vaersDescrs)\n",
" return pd.concat(dataFrames)\n",
"\n",
"def filterDataFrame(df, manufacturer = None, dose = None):\n",
" isCovid19 = df[\"VAX_TYPE\"] == \"COVID19\"\n",
" isManufacturer = df[\"VAX_MANU\"] == manufacturer if manufacturer is not None else True\n",
" isDose = df[\"VAX_DOSE_SERIES\"].str.contains(dose) if dose is not None else True\n",
" return df[isCovid19 & isManufacturer & isDose]\n",
"\n",
"def createAndFilterDataFrameFromDescrs(vaersDescrs, manufacturer, dose):\n",
" def filterDataFrame(df):\n",
" return df[\n",
" (df[\"VAX_TYPE\"] == \"COVID19\") &\n",
" (df[\"VAX_MANU\"] == manufacturer) &\n",
" (df[\"VAX_DOSE_SERIES\"].str.contains(dose))]\n",
" \n",
" return filterDataFrame(createDataFrameFromDescrs(vaersDescrs))\n",
" return filterDataFrame(createDataFrameFromDescrs(vaersDescrs), manufacturer = manufacturer, dose = dose)\n",
"\n",
"def createDataFrameSevereEffectsFromDescrs(vaersDescrs, dose):\n",
" def filterDataFrame(df):\n",
" return df[\n",
" (df[\"VAX_TYPE\"] == \"COVID19\") &\n",
" (df[\"VAX_DOSE_SERIES\"].str.contains(dose))]\n",
"\n",
" return filterDataFrame(createDataFrameFromDescrs(vaersDescrs))"
" return filterDataFrame(createDataFrameFromDescrs(vaersDescrs), dose = dose)"
]
},
{
@@ -122,6 +117,7 @@
"def createCompanyByBatchCodeTable(df):\n",
" return createManufacturerByBatchCodeTable(df).rename(columns = {\"VAX_MANU\": \"COMPANY\"})\n",
"\n",
"# create table from https://www.howbadismybatch.com/combined.html\n",
"def createSevereEffectsBatchCodeTable(df):\n",
" def filterDataFrame(df, col):\n",
" return df[df[col] == 'Y']['VAX_LOT']\n",