41 lines
1.7 KiB
Python
41 lines
1.7 KiB
Python
from DataFrameFilter import DataFrameFilter
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import VaersReader
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import pandas as pd
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from VaersDescrReader import VaersDescrReader
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from CountryColumnAdder import CountryColumnAdder
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def getInternationalVaersCovid19(years):
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internationalVaers = pd.concat(
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[
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VaersReader.getVaersForYears(years),
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VaersReader.getNonDomesticVaers()
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])
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internationalVaersCovid19 = DataFrameFilter().filterByCovid19(internationalVaers)
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return internationalVaersCovid19
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def get_international_VAERSVAX_VAERSSYMPTOMS_Covid19(years):
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VAERSDATA, VAERSVAX, VAERSSYMPTOMS = _get_VAERSDATA_VAERSVAX_VAERSSYMPTOMS(years)
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VAERSVAX_Covid19_CountryColumn = _get_VAERSVAX_Covid19_CountryColumn(VAERSVAX, CountryColumnAdder(VAERSDATA))
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return VAERSVAX_Covid19_CountryColumn, VAERSSYMPTOMS
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def _get_VAERSDATA_VAERSVAX_VAERSSYMPTOMS(years):
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vaersDescrReader = VaersDescrReader(dataDir = "VAERS")
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vaersDescrs = vaersDescrReader.readVaersDescrsForYears(years) + [vaersDescrReader.readNonDomesticVaersDescr()]
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return (_getVaersDescrByName(vaersDescrs, 'VAERSDATA'),
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_getVaersDescrByName(vaersDescrs, 'VAERSVAX'),
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_getVaersDescrByName(vaersDescrs, 'VAERSSYMPTOMS'))
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def _getVaersDescrByName(vaersDescrs, vaersDescrName):
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return pd.concat([vaersDescr[vaersDescrName] for vaersDescr in vaersDescrs])
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def _get_VAERSVAX_Covid19_CountryColumn(VAERSVAX, countryColumnAdder):
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VAERSVAX.dropna(subset = ['VAX_LOT'], inplace = True)
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VAERSVAX_Covid19 = DataFrameFilter().filterByCovid19(VAERSVAX)
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VAERSVAX_Covid19_CountryColumn = countryColumnAdder.addCountryColumn(VAERSVAX_Covid19)
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return VAERSVAX_Covid19_CountryColumn
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