41 lines
2.2 KiB
Python
41 lines
2.2 KiB
Python
import pandas as pd
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from CompletedBatchcodeColumnAdder import CompletedBatchcodeColumnAdder
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from BatchcodeCompletion import BatchcodeCompletion
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from CountriesColumnAdder import CountriesColumnAdder
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from BatchCodeTableFactory import BatchCodeTableFactory
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from InternationalVaersCovid19Provider import getInternationalVaersCovid19
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def getCountriesByCompletedBatchcode(internationalVaersCovid19):
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result = _readExploration('data/Country By Batchcode Search Term.csv', indexName = 'Batchcode Search Term')
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result = _addCompletedBatchcodeColumn(result, internationalVaersCovid19)
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columnName = 'Countries'
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result = CountriesColumnAdder().addCountriesColumn(result, columnName = columnName)
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return result[[columnName]].droplevel('Batchcode Search Term')
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def _addCompletedBatchcodeColumn(country_By_Batchcode_Search_Term, internationalVaersCovid19):
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return CompletedBatchcodeColumnAdder(_getCompleteBatchcode(internationalVaersCovid19)).addCompletedBatchcodeColumn(country_By_Batchcode_Search_Term)
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def _getCompleteBatchcode(internationalVaersCovid19):
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batchCodeTable = BatchCodeTableFactory(internationalVaersCovid19).createGlobalBatchCodeTable()
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return BatchcodeCompletion(ADR_by_Batchcode = batchCodeTable).completeBatchcode
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def getCountriesByClickedBatchcode():
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result = _readExploration('data/Country By Clicked Batchcode.csv', indexName = 'Clicked Batchcode')
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columnName = 'Countries'
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result = CountriesColumnAdder().addCountriesColumn(result, columnName = columnName)
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return result[[columnName]]
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def _readExploration(csvFile, indexName):
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exploration = pd.read_csv(csvFile, header=[0], index_col=0, skiprows=6, on_bad_lines='warn')
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exploration.drop(index=indexName, inplace=True)
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exploration.index.rename(indexName, inplace=True)
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exploration.drop(columns='Totals', inplace=True)
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for column in exploration.columns:
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exploration[column] = exploration[column].astype('int64')
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return exploration
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def getCountriesByBatchcodeBeforeDeletion():
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internationalVaersCovid19 = getInternationalVaersCovid19(dataDir = 'VAERS/VAERSBeforeDeletion', years = [2020, 2021, 2022])
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batchCodeTable = BatchCodeTableFactory(internationalVaersCovid19).createGlobalBatchCodeTable()
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return batchCodeTable[['Countries']]
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