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displacing "Lower Confidence Limit of Proportional Reporting Ratio"

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frankknoll
2023-11-24 00:12:53 +01:00
parent c834126726
commit fa058a30fd
8 changed files with 18766 additions and 252 deletions
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src/HowBadIsMyBatch.ipynb
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@@ -449,13 +449,14 @@
{
"cell_type": "code",
"execution_count": null,
"id": "eaf8fe21",
"metadata": {},
"outputs": [],
"source": [
"prrByVaccineAndSymptom = pd.read_csv(\n",
" 'data/safety-signal-sym.csv',\n",
" index_col = 'VACCINE')\n",
" 'data/tLCI.csv',\n",
" usecols = lambda x: x != \"Unnamed: 0\",\n",
" index_col = 'VAX_TYPE')\n",
"prrByVaccineAndSymptom.index.name = 'VACCINE'\n",
"prrByVaccineAndSymptom"
]
},
@@ -499,7 +500,7 @@
"metadata": {},
"outputs": [],
"source": [
"prrBySymptomByVaccineWithHighPrrs = PrrSeriesTransformer.filterByHighPrrs(prrBySymptomByVaccine)\n",
"prrBySymptomByVaccineWithHighPrrs = PrrSeriesTransformer.filterPrrs(prrBySymptomByVaccine, lambda prr: prr >= 2)\n",
"prrBySymptomByVaccineWithHighPrrs"
]
},
@@ -604,7 +605,7 @@
"metadata": {},
"outputs": [],
"source": [
"prrBySymptomByLotWithHighPrrs = PrrSeriesTransformer.filterByHighPrrs(prrBySymptomByLot)\n",
"prrBySymptomByLotWithHighPrrs = PrrSeriesTransformer.filterPrrs(prrBySymptomByLot, lambda prr: prr > 1)\n",
"prrBySymptomByLotWithHighPrrs"
]
},