refactoring
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@@ -2,19 +2,8 @@ from IOUtils import IOUtils
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import numpy as np
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def createAndSaveBatchCodeTables(
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minADRsForLethality,
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batchCodeTableFactory,
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onCountryProcessed = lambda country: None):
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_createAndSaveBatchCodeTableForCountry(
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createBatchCodeTableForCountry = lambda country: batchCodeTableFactory.createGlobalBatchCodeTable(),
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country = 'Global',
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minADRsForLethality = minADRsForLethality,
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onCountryProcessed = onCountryProcessed)
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def _createAndSaveBatchCodeTableForCountry(createBatchCodeTableForCountry, country, minADRsForLethality, onCountryProcessed):
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batchCodeTable = createBatchCodeTableForCountry(country)
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def createAndSaveGlobalBatchCodeTable(minADRsForLethality, batchCodeTableFactory):
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batchCodeTable = batchCodeTableFactory.createGlobalBatchCodeTable()
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batchCodeTable.index.set_names("Batch", inplace=True)
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if minADRsForLethality is not None:
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batchCodeTable.loc[
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@@ -33,7 +22,4 @@ def _createAndSaveBatchCodeTableForCountry(createBatchCodeTableForCountry, count
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'Severe reports',
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'Lethality'
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]]
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IOUtils.saveDataFrameAsJson(
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batchCodeTable,
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'../docs/data/batchCodeTables/' + country + '.json')
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onCountryProcessed(country)
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IOUtils.saveDataFrameAsJson(batchCodeTable, '../docs/data/batchCodeTables/Global.json')
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@@ -18,7 +18,7 @@
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"from DateProvider import DateProvider\n",
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"from InternationalVaersCovid19Provider import getInternationalVaersCovid19, get_international_VAERSVAX_VAERSSYMPTOMS_Covid19\n",
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"from BatchCodeTableHtmlUpdater import updateBatchCodeTableHtmlFile\n",
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"from BatchCodeTablePersister import createAndSaveBatchCodeTables\n",
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"from BatchCodeTablePersister import createAndSaveGlobalBatchCodeTable\n",
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"from SymptomByBatchcodeTableFactory import SymptomByBatchcodeTableFactory\n",
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"from HistogramFactoryAndPersister import createAndSaveGlobalHistograms\n",
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"from BatchCodeTableFactory import BatchCodeTableFactory"
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@@ -149,10 +149,9 @@
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"metadata": {},
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"outputs": [],
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"source": [
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"createAndSaveBatchCodeTables(\n",
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"createAndSaveGlobalBatchCodeTable(\n",
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" minADRsForLethality = 100,\n",
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" batchCodeTableFactory = BatchCodeTableFactory(internationalVaersCovid19),\n",
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" onCountryProcessed = display)"
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" batchCodeTableFactory = BatchCodeTableFactory(internationalVaersCovid19))"
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]
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},
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{
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