diff --git a/HowBadIsMyBatch.ipynb b/HowBadIsMyBatch.ipynb index 6c3b6319dcf..c5e3db712b7 100644 --- a/HowBadIsMyBatch.ipynb +++ b/HowBadIsMyBatch.ipynb @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": null, + "execution_count": 3, "id": "9de5907f-18f5-4cb1-903e-26028ff1fa03", "metadata": {}, "outputs": [], @@ -15,20 +15,690 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 4, "id": "ad0e6044", "metadata": {}, "outputs": [], "source": [ - "df_patients_22 = pd.read_csv(\"2021VAERSData/2021VAERSDATA.csv\", index_col='VAERS_ID', encoding='latin1', low_memory=False)" + "df_patients_22 = pd.read_csv(\"VAERS/2021VAERSData/2021VAERSDATA.csv\", index_col='VAERS_ID', encoding='latin1', low_memory=False)" ] }, { "cell_type": "code", - "execution_count": null, + "execution_count": 5, "id": "4472e902", "metadata": {}, - "outputs": [], + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "\n", + "\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "
RECVDATESTATEAGE_YRSCAGE_YRCAGE_MOSEXRPT_DATESYMPTOM_TEXTDIEDDATEDIEDL_THREATER_VISITHOSPITALHOSPDAYSX_STAYDISABLERECOVDVAX_DATEONSET_DATENUMDAYSLAB_DATAV_ADMINBYV_FUNDBYOTHER_MEDSCUR_ILLHISTORYPRIOR_VAXSPLTTYPEFORM_VERSTODAYS_DATEBIRTH_DEFECTOFC_VISITER_ED_VISITALLERGIES
VAERS_ID
91660001/01/2021TX33.033.0NaNFNaNRight side of epiglottis swelled up and hinder...NaNNaNNaNNaNNaNNaNNaNNaNY12/28/202012/30/20202.0NonePVTNaNNoneNoneNoneNaNNaN201/01/2021NaNYNaNPcn and bee venom
91660101/01/2021CA73.073.0NaNFNaNApproximately 30 min post vaccination administ...NaNNaNNaNNaNNaNNaNNaNNaNY12/31/202012/31/20200.0NaNSENNaNPatient residing at nursing facility. See pati...Patient residing at nursing facility. See pati...Patient residing at nursing facility. See pati...NaNNaN201/01/2021NaNYNaN\"Dairy\"
91660201/01/2021WA23.023.0NaNFNaNAbout 15 minutes after receiving the vaccine, ...NaNNaNNaNNaNNaNNaNNaNNaNU12/31/202012/31/20200.0NaNSENNaNNoneNoneNoneNaNNaN201/01/2021NaNNaNYShellfish
91660301/01/2021WA58.058.0NaNFNaNextreme fatigue, dizziness,. could not lift my...NaNNaNNaNNaNNaNNaNNaNNaNY12/23/202012/23/20200.0noneWRKNaNnonekidney infectiondiverticulitis, mitral valve prolapse, osteoar...got measles from measel shot, mums from mumps ...NaN201/01/2021NaNNaNNaNDiclofenac, novacaine, lidocaine, pickles, tom...
91660401/01/2021TX47.047.0NaNFNaNInjection site swelling, redness, warm to the ...NaNNaNNaNNaNNaNNaNNaNNaNN12/22/202012/29/20207.0NaNPUBNaNNaNaNaNNaNNaN201/01/2021NaNNaNNaNNa
.........................................................................................................
199712012/31/2021ID56.056.0NaNMNaNI had symptoms of low level un-diagnosed kidn...NaNNaNNaNNaNNaNNaNNaNNaNY11/28/202111/30/20212.0lab test for UTIUNKNaNnoneun-diagnosed kidney infectionnoneNaNNaN212/31/2021NaNYNaNnone
199712112/31/2021OH69.069.0NaNMNaNI got very bad eczema after first shot. Then i...NaNNaNNaNNaNNaNNaNNaNNaNN02/26/202103/04/20216.0went to my doctor he said I have eczema. Gave...PHMNaNb12 and d3 vitaminsNaNhypothyroidNaNNaN212/31/2021NaNNaNNaNpenicillin, statin drugs, codeine
199712212/31/2021NV50.050.0NaNMNaNHives all over the body and swelling of the li...NaNNaNNaNNaNNaNNaNNaNNaNU09/04/202110/01/202127.0NaNPHMNaNNaNNoneNoneNaNNaN212/31/2021NaNNaNNaNNone
199866812/31/2021SCNaNNaNNaNFNaNArm tendernessNaNNaNNaNNaNNaNNaNNaNNaNYNaNNaNNaNNaNPVTNaNNaNNaNNaNNaNNaN212/31/2021NaNNaNNaNNaN
199866912/31/2021CA59.059.0NaNMNaNCan't get up, all joints hurt States he is in ...NaNNaNNaNNaNNaNNaNNaNNaNN04/29/202105/05/20216.0Blood test.PVTNaNNaNNaNNaNNaNNaN207/07/2021NaNYNaNNKA
\n", + "

749067 rows × 34 columns

\n", + "
" + ], + "text/plain": [ + " RECVDATE STATE AGE_YRS CAGE_YR CAGE_MO SEX RPT_DATE \\\n", + "VAERS_ID \n", + "916600 01/01/2021 TX 33.0 33.0 NaN F NaN \n", + "916601 01/01/2021 CA 73.0 73.0 NaN F NaN \n", + "916602 01/01/2021 WA 23.0 23.0 NaN F NaN \n", + "916603 01/01/2021 WA 58.0 58.0 NaN F NaN \n", + "916604 01/01/2021 TX 47.0 47.0 NaN F NaN \n", + "... ... ... ... ... ... .. ... \n", + "1997120 12/31/2021 ID 56.0 56.0 NaN M NaN \n", + "1997121 12/31/2021 OH 69.0 69.0 NaN M NaN \n", + "1997122 12/31/2021 NV 50.0 50.0 NaN M NaN \n", + "1998668 12/31/2021 SC NaN NaN NaN F NaN \n", + "1998669 12/31/2021 CA 59.0 59.0 NaN M NaN \n", + "\n", + " SYMPTOM_TEXT DIED DATEDIED \\\n", + "VAERS_ID \n", + "916600 Right side of epiglottis swelled up and hinder... NaN NaN \n", + "916601 Approximately 30 min post vaccination administ... NaN NaN \n", + "916602 About 15 minutes after receiving the vaccine, ... NaN NaN \n", + "916603 extreme fatigue, dizziness,. could not lift my... NaN NaN \n", + "916604 Injection site swelling, redness, warm to the ... NaN NaN \n", + "... ... ... ... \n", + "1997120 I had symptoms of low level un-diagnosed kidn... NaN NaN \n", + "1997121 I got very bad eczema after first shot. Then i... NaN NaN \n", + "1997122 Hives all over the body and swelling of the li... NaN NaN \n", + "1998668 Arm tenderness NaN NaN \n", + "1998669 Can't get up, all joints hurt States he is in ... NaN NaN \n", + "\n", + " L_THREAT ER_VISIT HOSPITAL HOSPDAYS X_STAY DISABLE RECOVD \\\n", + "VAERS_ID \n", + "916600 NaN NaN NaN NaN NaN NaN Y \n", + "916601 NaN NaN NaN NaN NaN NaN Y \n", + "916602 NaN NaN NaN NaN NaN NaN U \n", + "916603 NaN NaN NaN NaN NaN NaN Y \n", + "916604 NaN NaN NaN NaN NaN NaN N \n", + "... ... ... ... ... ... ... ... \n", + "1997120 NaN NaN NaN NaN NaN NaN Y \n", + "1997121 NaN NaN NaN NaN NaN NaN N \n", + "1997122 NaN NaN NaN NaN NaN NaN U \n", + "1998668 NaN NaN NaN NaN NaN NaN Y \n", + "1998669 NaN NaN NaN NaN NaN NaN N \n", + "\n", + " VAX_DATE ONSET_DATE NUMDAYS \\\n", + "VAERS_ID \n", + "916600 12/28/2020 12/30/2020 2.0 \n", + "916601 12/31/2020 12/31/2020 0.0 \n", + "916602 12/31/2020 12/31/2020 0.0 \n", + "916603 12/23/2020 12/23/2020 0.0 \n", + "916604 12/22/2020 12/29/2020 7.0 \n", + "... ... ... ... \n", + "1997120 11/28/2021 11/30/2021 2.0 \n", + "1997121 02/26/2021 03/04/2021 6.0 \n", + "1997122 09/04/2021 10/01/2021 27.0 \n", + "1998668 NaN NaN NaN \n", + "1998669 04/29/2021 05/05/2021 6.0 \n", + "\n", + " LAB_DATA V_ADMINBY \\\n", + "VAERS_ID \n", + "916600 None PVT \n", + "916601 NaN SEN \n", + "916602 NaN SEN \n", + "916603 none WRK \n", + "916604 NaN PUB \n", + "... ... ... \n", + "1997120 lab test for UTI UNK \n", + "1997121 went to my doctor he said I have eczema. Gave... PHM \n", + "1997122 NaN PHM \n", + "1998668 NaN PVT \n", + "1998669 Blood test. PVT \n", + "\n", + " V_FUNDBY OTHER_MEDS \\\n", + "VAERS_ID \n", + "916600 NaN None \n", + "916601 NaN Patient residing at nursing facility. See pati... \n", + "916602 NaN None \n", + "916603 NaN none \n", + "916604 NaN Na \n", + "... ... ... \n", + "1997120 NaN none \n", + "1997121 NaN b12 and d3 vitamins \n", + "1997122 NaN NaN \n", + "1998668 NaN NaN \n", + "1998669 NaN NaN \n", + "\n", + " CUR_ILL \\\n", + "VAERS_ID \n", + "916600 None \n", + "916601 Patient residing at nursing facility. See pati... \n", + "916602 None \n", + "916603 kidney infection \n", + "916604 Na \n", + "... ... \n", + "1997120 un-diagnosed kidney infection \n", + "1997121 NaN \n", + "1997122 None \n", + "1998668 NaN \n", + "1998669 NaN \n", + "\n", + " HISTORY \\\n", + "VAERS_ID \n", + "916600 None \n", + "916601 Patient residing at nursing facility. See pati... \n", + "916602 None \n", + "916603 diverticulitis, mitral valve prolapse, osteoar... \n", + "916604 NaN \n", + "... ... \n", + "1997120 none \n", + "1997121 hypothyroid \n", + "1997122 None \n", + "1998668 NaN \n", + "1998669 NaN \n", + "\n", + " PRIOR_VAX SPLTTYPE \\\n", + "VAERS_ID \n", + "916600 NaN NaN \n", + "916601 NaN NaN \n", + "916602 NaN NaN \n", + "916603 got measles from measel shot, mums from mumps ... NaN \n", + "916604 NaN NaN \n", + "... ... ... \n", + "1997120 NaN NaN \n", + "1997121 NaN NaN \n", + "1997122 NaN NaN \n", + "1998668 NaN NaN \n", + "1998669 NaN NaN \n", + "\n", + " FORM_VERS TODAYS_DATE BIRTH_DEFECT OFC_VISIT ER_ED_VISIT \\\n", + "VAERS_ID \n", + "916600 2 01/01/2021 NaN Y NaN \n", + "916601 2 01/01/2021 NaN Y NaN \n", + "916602 2 01/01/2021 NaN NaN Y \n", + "916603 2 01/01/2021 NaN NaN NaN \n", + "916604 2 01/01/2021 NaN NaN NaN \n", + "... ... ... ... ... ... \n", + "1997120 2 12/31/2021 NaN Y NaN \n", + "1997121 2 12/31/2021 NaN NaN NaN \n", + "1997122 2 12/31/2021 NaN NaN NaN \n", + "1998668 2 12/31/2021 NaN NaN NaN \n", + "1998669 2 07/07/2021 NaN Y NaN \n", + "\n", + " ALLERGIES \n", + "VAERS_ID \n", + "916600 Pcn and bee venom \n", + "916601 \"Dairy\" \n", + "916602 Shellfish \n", + "916603 Diclofenac, novacaine, lidocaine, pickles, tom... \n", + "916604 Na \n", + "... ... \n", + "1997120 none \n", + "1997121 penicillin, statin drugs, codeine \n", + "1997122 None \n", + "1998668 NaN \n", + "1998669 NKA \n", + "\n", + "[749067 rows x 34 columns]" + ] + }, + "execution_count": 5, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "df_patients_22.index\n", "df_patients_22" @@ -36,29 +706,222 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 6, "id": "fb54ec47", "metadata": {}, "outputs": [], "source": [ - "df_vax_22 = pd.read_csv(\"2021VAERSData/2021VAERSVAX.csv\", index_col='VAERS_ID', encoding='latin1')" + "df_vax_22 = pd.read_csv(\"VAERS/2021VAERSData/2021VAERSVAX.csv\", index_col='VAERS_ID', encoding='latin1')" ] }, { "cell_type": "code", - "execution_count": null, + "execution_count": 7, "id": "d8942466", "metadata": { "scrolled": false }, - "outputs": [], + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "\n", + "\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "
VAX_TYPEVAX_MANUVAX_LOTVAX_DOSE_SERIESVAX_ROUTEVAX_SITEVAX_NAME
VAERS_ID
916600COVID19MODERNA037K20A1IMLACOVID19 (COVID19 (MODERNA))
916601COVID19MODERNA025L20A1IMRACOVID19 (COVID19 (MODERNA))
916602COVID19PFIZER\\BIONTECHEL12841IMLACOVID19 (COVID19 (PFIZER-BIONTECH))
916603COVID19MODERNAunknownUNKNaNNaNCOVID19 (COVID19 (MODERNA))
916604COVID19MODERNANaN1IMLACOVID19 (COVID19 (MODERNA))
........................
2013746HIBVMERCK & CO. INC.T026960UNKIMLLHIB (PEDVAXHIB)
2013746PNC13PFIZER\\WYETHDR1779UNKIMLLPNEUMO (PREVNAR13)
2013746RV5MERCK & CO. INC.1742458UNKPOMOROTAVIRUS (ROTATEQ)
2013757DTAPIPVGLAXOSMITHKLINE BIOLOGICALS7P5J51IMLADTAP + IPV (KINRIX)
2013757MMRVMERCK & CO. INC.T0271111SCLAMEASLES + MUMPS + RUBELLA + VARICELLA (PROQUAD)
\n", + "

793346 rows × 7 columns

\n", + "
" + ], + "text/plain": [ + " VAX_TYPE VAX_MANU VAX_LOT VAX_DOSE_SERIES \\\n", + "VAERS_ID \n", + "916600 COVID19 MODERNA 037K20A 1 \n", + "916601 COVID19 MODERNA 025L20A 1 \n", + "916602 COVID19 PFIZER\\BIONTECH EL1284 1 \n", + "916603 COVID19 MODERNA unknown UNK \n", + "916604 COVID19 MODERNA NaN 1 \n", + "... ... ... ... ... \n", + "2013746 HIBV MERCK & CO. INC. T026960 UNK \n", + "2013746 PNC13 PFIZER\\WYETH DR1779 UNK \n", + "2013746 RV5 MERCK & CO. INC. 1742458 UNK \n", + "2013757 DTAPIPV GLAXOSMITHKLINE BIOLOGICALS 7P5J5 1 \n", + "2013757 MMRV MERCK & CO. INC. T027111 1 \n", + "\n", + " VAX_ROUTE VAX_SITE VAX_NAME \n", + "VAERS_ID \n", + "916600 IM LA COVID19 (COVID19 (MODERNA)) \n", + "916601 IM RA COVID19 (COVID19 (MODERNA)) \n", + "916602 IM LA COVID19 (COVID19 (PFIZER-BIONTECH)) \n", + "916603 NaN NaN COVID19 (COVID19 (MODERNA)) \n", + "916604 IM LA COVID19 (COVID19 (MODERNA)) \n", + "... ... ... ... \n", + "2013746 IM LL HIB (PEDVAXHIB) \n", + "2013746 IM LL PNEUMO (PREVNAR13) \n", + "2013746 PO MO ROTAVIRUS (ROTATEQ) \n", + "2013757 IM LA DTAP + IPV (KINRIX) \n", + "2013757 SC LA MEASLES + MUMPS + RUBELLA + VARICELLA (PROQUAD) \n", + "\n", + "[793346 rows x 7 columns]" + ] + }, + "execution_count": 7, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "df_vax_22" ] }, { "cell_type": "code", - "execution_count": null, + "execution_count": 8, "id": "d31c5225", "metadata": {}, "outputs": [], @@ -68,19 +931,212 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 9, "id": "be2b57c9", "metadata": { "scrolled": false }, - "outputs": [], + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "\n", + "\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "
VAX_TYPEVAX_MANUVAX_LOTVAX_DOSE_SERIESVAX_ROUTEVAX_SITEVAX_NAME
VAERS_ID
916600COVID19MODERNA037K20A1IMLACOVID19 (COVID19 (MODERNA))
916601COVID19MODERNA025L20A1IMRACOVID19 (COVID19 (MODERNA))
916602COVID19PFIZER\\BIONTECHEL12841IMLACOVID19 (COVID19 (PFIZER-BIONTECH))
916603COVID19MODERNAunknownUNKNaNNaNCOVID19 (COVID19 (MODERNA))
916604COVID19MODERNANaN1IMLACOVID19 (COVID19 (MODERNA))
........................
2005264COVID19PFIZER\\BIONTECHEN6208UNKNaNNaNCOVID19 (COVID19 (PFIZER-BIONTECH))
2005274COVID19MODERNA028L20AUNKIMLACOVID19 (COVID19 (MODERNA))
2005274COVID19MODERNA014M20AUNKIMLACOVID19 (COVID19 (MODERNA))
2005290COVID19JANSSEN1805020UNKIMNaNCOVID19 (COVID19 (JANSSEN))
2009884COVID19MODERNANaN2IMLACOVID19 (COVID19 (MODERNA))
\n", + "

737971 rows × 7 columns

\n", + "
" + ], + "text/plain": [ + " VAX_TYPE VAX_MANU VAX_LOT VAX_DOSE_SERIES VAX_ROUTE \\\n", + "VAERS_ID \n", + "916600 COVID19 MODERNA 037K20A 1 IM \n", + "916601 COVID19 MODERNA 025L20A 1 IM \n", + "916602 COVID19 PFIZER\\BIONTECH EL1284 1 IM \n", + "916603 COVID19 MODERNA unknown UNK NaN \n", + "916604 COVID19 MODERNA NaN 1 IM \n", + "... ... ... ... ... ... \n", + "2005264 COVID19 PFIZER\\BIONTECH EN6208 UNK NaN \n", + "2005274 COVID19 MODERNA 028L20A UNK IM \n", + "2005274 COVID19 MODERNA 014M20A UNK IM \n", + "2005290 COVID19 JANSSEN 1805020 UNK IM \n", + "2009884 COVID19 MODERNA NaN 2 IM \n", + "\n", + " VAX_SITE VAX_NAME \n", + "VAERS_ID \n", + "916600 LA COVID19 (COVID19 (MODERNA)) \n", + "916601 RA COVID19 (COVID19 (MODERNA)) \n", + "916602 LA COVID19 (COVID19 (PFIZER-BIONTECH)) \n", + "916603 NaN COVID19 (COVID19 (MODERNA)) \n", + "916604 LA COVID19 (COVID19 (MODERNA)) \n", + "... ... ... \n", + "2005264 NaN COVID19 (COVID19 (PFIZER-BIONTECH)) \n", + "2005274 LA COVID19 (COVID19 (MODERNA)) \n", + "2005274 LA COVID19 (COVID19 (MODERNA)) \n", + "2005290 NaN COVID19 (COVID19 (JANSSEN)) \n", + "2009884 LA COVID19 (COVID19 (MODERNA)) \n", + "\n", + "[737971 rows x 7 columns]" + ] + }, + "execution_count": 9, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "df_COVID19_22" ] }, { "cell_type": "code", - "execution_count": null, + "execution_count": 10, "id": "8c432ab2", "metadata": {}, "outputs": [], @@ -90,22 +1146,822 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 11, "id": "fef882ff", "metadata": {}, - "outputs": [], + "outputs": [ + { + "data": { + "text/plain": [ + "((749067, 34), (737971, 7), (737971, 41))" + ] + }, + "execution_count": 11, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "df_patients_22.shape, df_COVID19_22.shape, df_patients_COVID19.shape" ] }, { "cell_type": "code", - "execution_count": null, + "execution_count": 12, "id": "6ce15322", "metadata": { "scrolled": false }, - "outputs": [], + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "\n", + "\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "
RECVDATESTATEAGE_YRSCAGE_YRCAGE_MOSEXRPT_DATESYMPTOM_TEXTDIEDDATEDIEDL_THREATER_VISITHOSPITALHOSPDAYSX_STAYDISABLERECOVDVAX_DATEONSET_DATENUMDAYSLAB_DATAV_ADMINBYV_FUNDBYOTHER_MEDSCUR_ILLHISTORYPRIOR_VAXSPLTTYPEFORM_VERSTODAYS_DATEBIRTH_DEFECTOFC_VISITER_ED_VISITALLERGIESVAX_TYPEVAX_MANUVAX_LOTVAX_DOSE_SERIESVAX_ROUTEVAX_SITEVAX_NAME
VAERS_ID
91660001/01/2021TX33.033.0NaNFNaNRight side of epiglottis swelled up and hinder...NaNNaNNaNNaNNaNNaNNaNNaNY12/28/202012/30/20202.0NonePVTNaNNoneNoneNoneNaNNaN201/01/2021NaNYNaNPcn and bee venomCOVID19MODERNA037K20A1IMLACOVID19 (COVID19 (MODERNA))
91660101/01/2021CA73.073.0NaNFNaNApproximately 30 min post vaccination administ...NaNNaNNaNNaNNaNNaNNaNNaNY12/31/202012/31/20200.0NaNSENNaNPatient residing at nursing facility. See pati...Patient residing at nursing facility. See pati...Patient residing at nursing facility. See pati...NaNNaN201/01/2021NaNYNaN\"Dairy\"COVID19MODERNA025L20A1IMRACOVID19 (COVID19 (MODERNA))
91660201/01/2021WA23.023.0NaNFNaNAbout 15 minutes after receiving the vaccine, ...NaNNaNNaNNaNNaNNaNNaNNaNU12/31/202012/31/20200.0NaNSENNaNNoneNoneNoneNaNNaN201/01/2021NaNNaNYShellfishCOVID19PFIZER\\BIONTECHEL12841IMLACOVID19 (COVID19 (PFIZER-BIONTECH))
91660301/01/2021WA58.058.0NaNFNaNextreme fatigue, dizziness,. could not lift my...NaNNaNNaNNaNNaNNaNNaNNaNY12/23/202012/23/20200.0noneWRKNaNnonekidney infectiondiverticulitis, mitral valve prolapse, osteoar...got measles from measel shot, mums from mumps ...NaN201/01/2021NaNNaNNaNDiclofenac, novacaine, lidocaine, pickles, tom...COVID19MODERNAunknownUNKNaNNaNCOVID19 (COVID19 (MODERNA))
91660401/01/2021TX47.047.0NaNFNaNInjection site swelling, redness, warm to the ...NaNNaNNaNNaNNaNNaNNaNNaNN12/22/202012/29/20207.0NaNPUBNaNNaNaNaNNaNNaN201/01/2021NaNNaNNaNNaCOVID19MODERNANaN1IMLACOVID19 (COVID19 (MODERNA))
..............................................................................................................................
200526404/24/2021HINaNNaNNaNMNaNNoneNaNNaNNaNNaNNaNNaNNaNNaNYNaNNaNNaNNaNPVTNaNNaNNaNNaNNaNNaN204/24/2021NaNNaNNaNNaNCOVID19PFIZER\\BIONTECHEN6208UNKNaNNaNCOVID19 (COVID19 (PFIZER-BIONTECH))
200527404/26/2021NC65.065.0NaNFNaNNew onset nasal herpes simplex coming up about...NaNNaNNaNNaNNaNNaNNaNNaNNaN03/01/202103/10/20219.0NaNPVTNaNNaNNaNNaNNaNNaN204/24/2021NaNYNaNNaNCOVID19MODERNA028L20AUNKIMLACOVID19 (COVID19 (MODERNA))
200527404/26/2021NC65.065.0NaNFNaNNew onset nasal herpes simplex coming up about...NaNNaNNaNNaNNaNNaNNaNNaNNaN03/01/202103/10/20219.0NaNPVTNaNNaNNaNNaNNaNNaN204/24/2021NaNYNaNNaNCOVID19MODERNA014M20AUNKIMLACOVID19 (COVID19 (MODERNA))
200529004/21/2021MI44.044.0NaNMNaN5 weeks daily; Sweats, Nausea, Light headed, L...NaNNaNNaNNaNNaNNaNNaNNaNN03/17/202103/18/20211.0unremarkable; CBC, Comp Panel, Sed rate, D-dim...PHMNaNsee listNaNinsulin dependant diabetes, hypertension, obes...NaNNaN204/26/2021NaNYNaNBactrim, cephalexin, penicillinCOVID19JANSSEN1805020UNKIMNaNCOVID19 (COVID19 (JANSSEN))
200988404/26/2021NaN62.061.0NaNMNaNCoughWheeze Chills, night sweats, arm sore, ey...NaNNaNNaNNaNNaNNaNNaNNaNY04/21/202104/22/20211.0NaNOTHNaNNaNNaNNaNNaNNaN204/26/2021NaNNaNNaNNaNCOVID19MODERNANaN2IMLACOVID19 (COVID19 (MODERNA))
\n", + "

737971 rows × 41 columns

\n", + "
" + ], + "text/plain": [ + " RECVDATE STATE AGE_YRS CAGE_YR CAGE_MO SEX RPT_DATE \\\n", + "VAERS_ID \n", + "916600 01/01/2021 TX 33.0 33.0 NaN F NaN \n", + "916601 01/01/2021 CA 73.0 73.0 NaN F NaN \n", + "916602 01/01/2021 WA 23.0 23.0 NaN F NaN \n", + "916603 01/01/2021 WA 58.0 58.0 NaN F NaN \n", + "916604 01/01/2021 TX 47.0 47.0 NaN F NaN \n", + "... ... ... ... ... ... .. ... \n", + "2005264 04/24/2021 HI NaN NaN NaN M NaN \n", + "2005274 04/26/2021 NC 65.0 65.0 NaN F NaN \n", + "2005274 04/26/2021 NC 65.0 65.0 NaN F NaN \n", + "2005290 04/21/2021 MI 44.0 44.0 NaN M NaN \n", + "2009884 04/26/2021 NaN 62.0 61.0 NaN M NaN \n", + "\n", + " SYMPTOM_TEXT DIED DATEDIED \\\n", + "VAERS_ID \n", + "916600 Right side of epiglottis swelled up and hinder... NaN NaN \n", + "916601 Approximately 30 min post vaccination administ... NaN NaN \n", + "916602 About 15 minutes after receiving the vaccine, ... NaN NaN \n", + "916603 extreme fatigue, dizziness,. could not lift my... NaN NaN \n", + "916604 Injection site swelling, redness, warm to the ... NaN NaN \n", + "... ... ... ... \n", + "2005264 None NaN NaN \n", + "2005274 New onset nasal herpes simplex coming up about... NaN NaN \n", + "2005274 New onset nasal herpes simplex coming up about... NaN NaN \n", + "2005290 5 weeks daily; Sweats, Nausea, Light headed, L... NaN NaN \n", + "2009884 CoughWheeze Chills, night sweats, arm sore, ey... NaN NaN \n", + "\n", + " L_THREAT ER_VISIT HOSPITAL HOSPDAYS X_STAY DISABLE RECOVD \\\n", + "VAERS_ID \n", + "916600 NaN NaN NaN NaN NaN NaN Y \n", + "916601 NaN NaN NaN NaN NaN NaN Y \n", + "916602 NaN NaN NaN NaN NaN NaN U \n", + "916603 NaN NaN NaN NaN NaN NaN Y \n", + "916604 NaN NaN NaN NaN NaN NaN N \n", + "... ... ... ... ... ... ... ... \n", + "2005264 NaN NaN NaN NaN NaN NaN Y \n", + "2005274 NaN NaN NaN NaN NaN NaN NaN \n", + "2005274 NaN NaN NaN NaN NaN NaN NaN \n", + "2005290 NaN NaN NaN NaN NaN NaN N \n", + "2009884 NaN NaN NaN NaN NaN NaN Y \n", + "\n", + " VAX_DATE ONSET_DATE NUMDAYS \\\n", + "VAERS_ID \n", + "916600 12/28/2020 12/30/2020 2.0 \n", + "916601 12/31/2020 12/31/2020 0.0 \n", + "916602 12/31/2020 12/31/2020 0.0 \n", + "916603 12/23/2020 12/23/2020 0.0 \n", + "916604 12/22/2020 12/29/2020 7.0 \n", + "... ... ... ... \n", + "2005264 NaN NaN NaN \n", + "2005274 03/01/2021 03/10/2021 9.0 \n", + "2005274 03/01/2021 03/10/2021 9.0 \n", + "2005290 03/17/2021 03/18/2021 1.0 \n", + "2009884 04/21/2021 04/22/2021 1.0 \n", + "\n", + " LAB_DATA V_ADMINBY \\\n", + "VAERS_ID \n", + "916600 None PVT \n", + "916601 NaN SEN \n", + "916602 NaN SEN \n", + "916603 none WRK \n", + "916604 NaN PUB \n", + "... ... ... \n", + "2005264 NaN PVT \n", + "2005274 NaN PVT \n", + "2005274 NaN PVT \n", + "2005290 unremarkable; CBC, Comp Panel, Sed rate, D-dim... PHM \n", + "2009884 NaN OTH \n", + "\n", + " V_FUNDBY OTHER_MEDS \\\n", + "VAERS_ID \n", + "916600 NaN None \n", + "916601 NaN Patient residing at nursing facility. See pati... \n", + "916602 NaN None \n", + "916603 NaN none \n", + "916604 NaN Na \n", + "... ... ... \n", + "2005264 NaN NaN \n", + "2005274 NaN NaN \n", + "2005274 NaN NaN \n", + "2005290 NaN see list \n", + "2009884 NaN NaN \n", + "\n", + " CUR_ILL \\\n", + "VAERS_ID \n", + "916600 None \n", + "916601 Patient residing at nursing facility. See pati... \n", + "916602 None \n", + "916603 kidney infection \n", + "916604 Na \n", + "... ... \n", + "2005264 NaN \n", + "2005274 NaN \n", + "2005274 NaN \n", + "2005290 NaN \n", + "2009884 NaN \n", + "\n", + " HISTORY \\\n", + "VAERS_ID \n", + "916600 None \n", + "916601 Patient residing at nursing facility. See pati... \n", + "916602 None \n", + "916603 diverticulitis, mitral valve prolapse, osteoar... \n", + "916604 NaN \n", + "... ... \n", + "2005264 NaN \n", + "2005274 NaN \n", + "2005274 NaN \n", + "2005290 insulin dependant diabetes, hypertension, obes... \n", + "2009884 NaN \n", + "\n", + " PRIOR_VAX SPLTTYPE \\\n", + "VAERS_ID \n", + "916600 NaN NaN \n", + "916601 NaN NaN \n", + "916602 NaN NaN \n", + "916603 got measles from measel shot, mums from mumps ... NaN \n", + "916604 NaN NaN \n", + "... ... ... \n", + "2005264 NaN NaN \n", + "2005274 NaN NaN \n", + "2005274 NaN NaN \n", + "2005290 NaN NaN \n", + "2009884 NaN NaN \n", + "\n", + " FORM_VERS TODAYS_DATE BIRTH_DEFECT OFC_VISIT ER_ED_VISIT \\\n", + "VAERS_ID \n", + "916600 2 01/01/2021 NaN Y NaN \n", + "916601 2 01/01/2021 NaN Y NaN \n", + "916602 2 01/01/2021 NaN NaN Y \n", + "916603 2 01/01/2021 NaN NaN NaN \n", + "916604 2 01/01/2021 NaN NaN NaN \n", + "... ... ... ... ... ... \n", + "2005264 2 04/24/2021 NaN NaN NaN \n", + "2005274 2 04/24/2021 NaN Y NaN \n", + "2005274 2 04/24/2021 NaN Y NaN \n", + "2005290 2 04/26/2021 NaN Y NaN \n", + "2009884 2 04/26/2021 NaN NaN NaN \n", + "\n", + " ALLERGIES VAX_TYPE \\\n", + "VAERS_ID \n", + "916600 Pcn and bee venom COVID19 \n", + "916601 \"Dairy\" COVID19 \n", + "916602 Shellfish COVID19 \n", + "916603 Diclofenac, novacaine, lidocaine, pickles, tom... COVID19 \n", + "916604 Na COVID19 \n", + "... ... ... \n", + "2005264 NaN COVID19 \n", + "2005274 NaN COVID19 \n", + "2005274 NaN COVID19 \n", + "2005290 Bactrim, cephalexin, penicillin COVID19 \n", + "2009884 NaN COVID19 \n", + "\n", + " VAX_MANU VAX_LOT VAX_DOSE_SERIES VAX_ROUTE VAX_SITE \\\n", + "VAERS_ID \n", + "916600 MODERNA 037K20A 1 IM LA \n", + "916601 MODERNA 025L20A 1 IM RA \n", + "916602 PFIZER\\BIONTECH EL1284 1 IM LA \n", + "916603 MODERNA unknown UNK NaN NaN \n", + "916604 MODERNA NaN 1 IM LA \n", + "... ... ... ... ... ... \n", + "2005264 PFIZER\\BIONTECH EN6208 UNK NaN NaN \n", + "2005274 MODERNA 028L20A UNK IM LA \n", + "2005274 MODERNA 014M20A UNK IM LA \n", + "2005290 JANSSEN 1805020 UNK IM NaN \n", + "2009884 MODERNA NaN 2 IM LA \n", + "\n", + " VAX_NAME \n", + "VAERS_ID \n", + "916600 COVID19 (COVID19 (MODERNA)) \n", + "916601 COVID19 (COVID19 (MODERNA)) \n", + "916602 COVID19 (COVID19 (PFIZER-BIONTECH)) \n", + "916603 COVID19 (COVID19 (MODERNA)) \n", + "916604 COVID19 (COVID19 (MODERNA)) \n", + "... ... \n", + "2005264 COVID19 (COVID19 (PFIZER-BIONTECH)) \n", + "2005274 COVID19 (COVID19 (MODERNA)) \n", + "2005274 COVID19 (COVID19 (MODERNA)) \n", + "2005290 COVID19 (COVID19 (JANSSEN)) \n", + "2009884 COVID19 (COVID19 (MODERNA)) \n", + "\n", + "[737971 rows x 41 columns]" + ] + }, + "execution_count": 12, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "# pd.set_option('display.max_rows', 100)\n", "df_patients_COVID19" @@ -113,7 +1969,7 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 13, "id": "233bc590", "metadata": {}, "outputs": [], @@ -123,17 +1979,72 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 14, "id": "86e0e4f2", "metadata": {}, - "outputs": [], + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "\n", + "Int64Index: 339877 entries, 916600 to 2009884\n", + "Data columns (total 41 columns):\n", + " # Column Non-Null Count Dtype \n", + "--- ------ -------------- ----- \n", + " 0 RECVDATE 339877 non-null object \n", + " 1 STATE 302148 non-null object \n", + " 2 AGE_YRS 309475 non-null float64\n", + " 3 CAGE_YR 302392 non-null float64\n", + " 4 CAGE_MO 561 non-null float64\n", + " 5 SEX 339877 non-null object \n", + " 6 RPT_DATE 271 non-null object \n", + " 7 SYMPTOM_TEXT 339774 non-null object \n", + " 8 DIED 4694 non-null object \n", + " 9 DATEDIED 4392 non-null object \n", + " 10 L_THREAT 4753 non-null object \n", + " 11 ER_VISIT 26 non-null object \n", + " 12 HOSPITAL 20841 non-null object \n", + " 13 HOSPDAYS 13803 non-null float64\n", + " 14 X_STAY 152 non-null object \n", + " 15 DISABLE 4875 non-null object \n", + " 16 RECOVD 308614 non-null object \n", + " 17 VAX_DATE 323994 non-null object \n", + " 18 ONSET_DATE 311854 non-null object \n", + " 19 NUMDAYS 306537 non-null float64\n", + " 20 LAB_DATA 127507 non-null object \n", + " 21 V_ADMINBY 339877 non-null object \n", + " 22 V_FUNDBY 284 non-null object \n", + " 23 OTHER_MEDS 200657 non-null object \n", + " 24 CUR_ILL 163361 non-null object \n", + " 25 HISTORY 203490 non-null object \n", + " 26 PRIOR_VAX 18047 non-null object \n", + " 27 SPLTTYPE 97511 non-null object \n", + " 28 FORM_VERS 339877 non-null int64 \n", + " 29 TODAYS_DATE 337268 non-null object \n", + " 30 BIRTH_DEFECT 191 non-null object \n", + " 31 OFC_VISIT 61181 non-null object \n", + " 32 ER_ED_VISIT 34734 non-null object \n", + " 33 ALLERGIES 178840 non-null object \n", + " 34 VAX_TYPE 339877 non-null object \n", + " 35 VAX_MANU 339877 non-null object \n", + " 36 VAX_LOT 236149 non-null object \n", + " 37 VAX_DOSE_SERIES 339478 non-null object \n", + " 38 VAX_ROUTE 301519 non-null object \n", + " 39 VAX_SITE 246947 non-null object \n", + " 40 VAX_NAME 339877 non-null object \n", + "dtypes: float64(5), int64(1), object(35)\n", + "memory usage: 108.9+ MB\n" + ] + } + ], "source": [ "df_PFIZER_BIONTECH.info()" ] }, { "cell_type": "code", - "execution_count": null, + "execution_count": 15, "id": "4b3cb943", "metadata": {}, "outputs": [], @@ -143,12 +2054,113 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 16, "id": "349da946", "metadata": { "scrolled": false }, - "outputs": [], + "outputs": [ + { + "data": { + "text/html": [ + "
\n", + "\n", + "\n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + " \n", + "
VAX_LOT
VAERS_ID
917117NaN
917790NaN
917793NaN
918065025J20-2A
918487011L2Oa
......
1995984NaN
1996537037F21A
1996542NaN
1996546NaN
1996867003A21A
\n", + "

4694 rows × 1 columns

\n", + "
" + ], + "text/plain": [ + " VAX_LOT\n", + "VAERS_ID \n", + "917117 NaN\n", + "917790 NaN\n", + "917793 NaN\n", + "918065 025J20-2A\n", + "918487 011L2Oa\n", + "... ...\n", + "1995984 NaN\n", + "1996537 037F21A\n", + "1996542 NaN\n", + "1996546 NaN\n", + "1996867 003A21A\n", + "\n", + "[4694 rows x 1 columns]" + ] + }, + "execution_count": 16, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "df = df_PFIZER_BIONTECH[df_PFIZER_BIONTECH['DIED']=='Y'][['VAX_LOT']]\n", "df" @@ -156,12 +2168,661 @@ }, { "cell_type": "code", - "execution_count": null, + "execution_count": 17, "id": "9c5ff2fd", "metadata": { "scrolled": false }, - "outputs": [], + "outputs": [ + { + "data": { + "text/plain": [ + "VAX_LOT \n", + "039K20A 93\n", + "012L20A 72\n", + "010M20A 69\n", + "013L20A 68\n", + "030L20A 54\n", + "037K20A 53\n", + "016M20A 53\n", + "012M20A 53\n", + "029L20A 51\n", + "024M20A 51\n", + "025L20A 50\n", + "022M20A 50\n", + "027L20A 48\n", + "010A21A 48\n", + "013M20A 45\n", + "026A21A 45\n", + "031L20A 45\n", + "015M20A 45\n", + "007M20A 44\n", + "026L20A 42\n", + "031M20A 40\n", + "013A21A 39\n", + "011A21A 39\n", + "032L20A 38\n", + "004M20A 38\n", + "030A21A 38\n", + "011J20A 37\n", + "011M20A 37\n", + "028L20A 35\n", + "011L20A 35\n", + "041L20A 35\n", + "025J20-2A 32\n", + "Unknown 32\n", + "030M20A 31\n", + "012A21A 31\n", + "032H20A 31\n", + "040A21A 30\n", + "032M20A 30\n", + "043L20A 30\n", + "042L20A 29\n", + "006M20A 29\n", + "023M20A 29\n", + "002A21A 27\n", + "017B21A 26\n", + "036A21A 26\n", + "027A21A 26\n", + "048A21A 23\n", + "047A21A 22\n", + "006B21A 22\n", + "003A21A 22\n", + "unknown 22\n", + "025B21A 21\n", + "020B21A 21\n", + "044A21A 20\n", + "025A21A 20\n", + "038K20A 20\n", + "014M20A 19\n", + "031A21A 18\n", + "021B21A 18\n", + "003B21A 18\n", + "007B21A 17\n", + "029A21A 17\n", + "031B21A 17\n", + "038A21A 16\n", + "001A21A 15\n", + "001B21A 15\n", + "019B21A 14\n", + "045A21A 14\n", + "018B21A 14\n", + "025J20A 14\n", + "046A21A 14\n", + "036B21A 14\n", + "026B21A 13\n", + "016B21A 13\n", + "027B21A 13\n", + "008B21A 13\n", + "028A21A 12\n", + "002C21A 12\n", + "029K20A 11\n", + "009C21A 11\n", + "040B21A 11\n", + "038B21A 11\n", + "002B21A 11\n", + "039B21A 11\n", + "047B21A 10\n", + "006C21A 10\n", + "045B21A 10\n", + "048B21A 10\n", + "046B21A 10\n", + "030H21B 10\n", + "008C21A 9\n", + "030B21A 9\n", + "UNKNOWN 9\n", + "001C21A 9\n", + "039A21A 8\n", + "017C21A 8\n", + "044B21A 8\n", + "032B21A 8\n", + "939906 8\n", + "004C21A 8\n", + "038C21A 8\n", + "042B21A 7\n", + "035C21A 7\n", + "047C21A 7\n", + "025C21A 7\n", + "037A21B 7\n", + "043B21A 7\n", + "041C21A 7\n", + "030m20a 6\n", + "016C21A 6\n", + "048C21A 6\n", + "006D21A 6\n", + "NO LOT # AVAILA 6\n", + "003C21A 6\n", + "027C21A 6\n", + "037B21A 6\n", + "058H21A 6\n", + "052E21A 6\n", + "007C21A 6\n", + "013F21A 5\n", + "008B21-2A 5\n", + "033C21A 5\n", + "005C21A 5\n", + "030a21a 5\n", + "026a21a 5\n", + "025J202A 5\n", + "033B21A 4\n", + "037k20a 4\n", + "003b21a 4\n", + "024C21A 4\n", + "008B212A 4\n", + "026D21A 4\n", + "040a21a 4\n", + "065F21A 4\n", + "022C21A 4\n", + "021C21A 4\n", + "031l20a 4\n", + "041B21A 4\n", + "032F21A 4\n", + "024m20a 4\n", + "051F21A 4\n", + "015m20a 3\n", + "002a21a 3\n", + "038k20a 3\n", + "002c21a 3\n", + "007m20a 3\n", + "026C21A 3\n", + "091D21A 3\n", + "025b21a 3\n", + "062E21A 3\n", + "016m20a 3\n", + "027b21a 3\n", + "039K208 3\n", + "017E21A 3\n", + "017F21A 3\n", + "039k20a 3\n", + "020f21a 3\n", + "076C21A 3\n", + "03M20A 3\n", + "071F21A 3\n", + "039K20-2A 3\n", + "051C21A 3\n", + "? 3\n", + "037k20A 3\n", + "045C21A 3\n", + "033c21a 3\n", + "009D21A 3\n", + "036C21A 3\n", + "010a21a 3\n", + "046C21A 3\n", + "CVO224 3\n", + "011F21A 3\n", + "Moderna 3\n", + "030l20a 3\n", + "048F21A 3\n", + "012H21B 3\n", + "004m20a 3\n", + "069F21A 3\n", + "014C21A 3\n", + "050C21A 3\n", + "013a21a 3\n", + "003F21A 3\n", + "042B212A 2\n", + "066F21A 2\n", + "039k20-2a 2\n", + "039k20A 2\n", + "035c21A 2\n", + "046AZ1A 2\n", + "054C21A 2\n", + "040b21a 2\n", + "032l20a 2\n", + "038a21a 2\n", + "034F21A 2\n", + "024M2OA 2\n", + "034C21A 2\n", + "045a21a 2\n", + "027H21B 2\n", + "045J21A 2\n", + "023m20a 2\n", + "036a21a 2\n", + "041620A 2\n", + "025J20 2\n", + "049C21A 2\n", + "048b21a 2\n", + "048a21a 2\n", + "043821A 2\n", + "058F21A 2\n", + "057G20A 2\n", + "037a21b 2\n", + "031A21 2\n", + "037K2OA 2\n", + "062G20A 2\n", + "050e21a 2\n", + "053E21A 2\n", + "037C21A 2\n", + "047a21a 2\n", + "043220A 2\n", + "062e21a 2\n", + "037B31A 2\n", + "027C20A 2\n", + "052c21a 2\n", + "01A21A 2\n", + "023C21A 2\n", + "007M20 2\n", + "13L20A 2\n", + "16B21A 2\n", + "004c21a 2\n", + "005c21a 2\n", + "014m20a 2\n", + "014c21a 2\n", + "014F21A 2\n", + "013m20a 2\n", + "013l20a 2\n", + "MOD039K20A 2\n", + "006m20a 2\n", + "013L20a 2\n", + "013120A 2\n", + "UNKNOWN/NA 2\n", + "012m20a 2\n", + "42L20A 2\n", + "007m20A 2\n", + "012F21A 2\n", + "011m20a 2\n", + "EN6199 2\n", + "939902 2\n", + "939905 2\n", + "948548 2\n", + "022m20a 2\n", + "011D21A 2\n", + "01021A 2\n", + "003a21a 2\n", + "006821A 2\n", + "017c21a 2\n", + "unk 2\n", + "unavailable 2\n", + "001a21a 2\n", + "001121A 2\n", + "022B21A 2\n", + "019F21A 2\n", + "045Ax119 1\n", + "not documented 1\n", + "ER8727 1\n", + "042B1-2A 1\n", + "041220A 1\n", + "ER8729 1\n", + "045A21H 1\n", + "EW0158 1\n", + "EW0186 1\n", + "n/A 1\n", + "mRNA1273 1\n", + "G38A21A 1\n", + "EN6200 1\n", + "EN604 1\n", + "unavailable (pl 1\n", + "EL9266 1\n", + "EL1283 1\n", + "EL3247 1\n", + "unknown, check 1\n", + "EL3248 1\n", + "EL3302 1\n", + "EL9261 1\n", + "046821A 1\n", + "Given on 7/20/2 1\n", + "040D21A 1\n", + "ELO140 1\n", + "040M20A 1\n", + "04613212 1\n", + "ELP264 1\n", + "EM9810 1\n", + "c039b21a 1\n", + "LOT: 011L20A Ex 1\n", + "Given on 8/17/2 1\n", + "U11620A or 6111 1\n", + "Not provided 1\n", + "Unknow 1\n", + "O-012L20A 1\n", + "O-031M20A 1\n", + "O11L20A 1\n", + "O13L20A 1\n", + "O14MZOA 1\n", + "0421321A 1\n", + "O31B21A 1\n", + "O4SC21A 1\n", + "O54C21A 1\n", + "042b21-2a 1\n", + "Unk 1\n", + "RA 5190 1\n", + "RA5190 1\n", + "041l20A 1\n", + "041MZ0A 1\n", + "041MZ017 1\n", + "Y13A21A 1\n", + "044b21a 1\n", + "044a21a 1\n", + "ZTC540693 1\n", + "Lot#007M20A, # 1\n", + "MOD 040C21A 1\n", + "MOD/013L20A 1\n", + "W1010A21A 1\n", + "VO1B21F 1\n", + "Moderna 021C21A 1\n", + "044921A 1\n", + "Moderna/039K20A 1\n", + "041LAUA 1\n", + "E261283 1\n", + "043L20A 02/10/2 1\n", + "EL0140 1\n", + "CO3A21A 1\n", + "046B23A 1\n", + "088D214 1\n", + "061e21A 1\n", + "061F21A 1\n", + "061B21A 1\n", + "05E214 1\n", + "08B21A 1\n", + "059E21A 1\n", + "059A21A 1\n", + "0c1a21a 1\n", + "102627 1\n", + "1273 1\n", + "058f21a 1\n", + "12M20A 1\n", + "13508314 1\n", + "1442 1\n", + "14M20A 1\n", + "1538554 1\n", + "15M20A 1\n", + "088D21A 1\n", + "0880021A 1\n", + "054c21a 1\n", + "085A21A 1\n", + "070M20A 1\n", + "067F21A 1\n", + "073K20A 1\n", + "0746C21A 1\n", + "077L20A 1\n", + "077c21b 1\n", + "066F212 1\n", + "066D 1\n", + "040C21A 1\n", + "078C21A 1\n", + "078c21a 1\n", + "07B21A 1\n", + "07L20A 1\n", + "065F214 1\n", + "07M20A 1\n", + "064H21a 1\n", + "0819E21A 1\n", + "168342635 1\n", + "17B21A 1\n", + "Don?t know 1\n", + "37K20A 1\n", + "048c21a 1\n", + "5/4/2021 1\n", + "623MZ0A 1\n", + "693894 1\n", + "80777-0273-99 1\n", + "91301 1\n", + "939901 1\n", + "048B211A 1\n", + "939909 1\n", + "A-HRSA-043B2 1\n", + "047AZIA 1\n", + "Congestive Hear 1\n", + "Covid Moderna 0 1\n", + "D06B7 or 21A 1\n", + "046b21a 1\n", + "046azia 1\n", + "D12L20A 1\n", + "38077727399 1\n", + "310M20A 1\n", + "210414-015 1\n", + "04A21A 1\n", + "053C21A 1\n", + "052e21a 1\n", + "23M20A 1\n", + "052EZ1A 1\n", + "24M20A 1\n", + "2599133 1\n", + "26L20A 1\n", + "051E21A 1\n", + "27C21A 1\n", + "050ez1a 1\n", + "28L20A0 1\n", + "29k21A 1\n", + "050E2114 1\n", + "309K20A 1\n", + "04TAZ1A 1\n", + "04DC21A 1\n", + "04C21A 1\n", + "#027L20A 1\n", + "031L20 A 1\n", + "03ZM20A 1\n", + "017821A 1\n", + "012M20a 1\n", + "012L20R 1\n", + "0124214 1\n", + "012120a 1\n", + "011j20A 1\n", + "011f21a 1\n", + "011a21a 1\n", + "011M208 1\n", + "011M202A 1\n", + "011L2Oa 1\n", + "011L20a 1\n", + "011J220A 1\n", + "011J20A17691231 1\n", + "011J204 1\n", + "011I20A 1\n", + "011AZ1A 1\n", + "01120A 1\n", + "0111Z0A 1\n", + "011021A 1\n", + "011 1\n", + "010m2qa 1\n", + "010a21A 1\n", + "010M2OA 1\n", + "010A21 1\n", + "0108218 1\n", + "012M2CA 1\n", + "012M2OA 1\n", + "012l20a 1\n", + "0161321A 1\n", + "016b21a 1\n", + "016MZOA 1\n", + "016M210A 1\n", + "016M20a 1\n", + "016M20-A 1\n", + "016M02A 1\n", + "016C219 1\n", + "016B12A 1\n", + "016420A 1\n", + "0163L20A 1\n", + "01620A 1\n", + "015b21a 1\n", + "0131L20A 1\n", + "015M2OA 1\n", + "015M21A 1\n", + "015M02A 1\n", + "015B21A 1\n", + "014F1A 1\n", + "0146214 1\n", + "013M2OA 1\n", + "013M20 1\n", + "013M02A 1\n", + "013A20A 1\n", + "013620A 1\n", + "00C21A 1\n", + "009c21a 1\n", + "009C21B 1\n", + "002A221A 1\n", + "004D21A 1\n", + "004021A 1\n", + "003c21a 1\n", + "00321A 1\n", + "002b21a 1\n", + "002b 1\n", + "002V21A 1\n", + "002M20A 1\n", + "002F21A 1\n", + "002CIA 1\n", + "002B21B 1\n", + "0029L20A 1\n", + "004M208 1\n", + "001c21a 1\n", + "001b21a 1\n", + "001L20A 1\n", + "001CZ1A 1\n", + "001821A 1\n", + "0016M20A 1\n", + "0012A 1\n", + "0011M20A 1\n", + "#069H21A 1\n", + "#065F21A 1\n", + "#039K20A 1\n", + "004F21A 1\n", + "004M20A. 012A 1\n", + "009C2117 1\n", + "007B214 1\n", + "009021a 1\n", + "008b21a 1\n", + "008b212a 1\n", + "008B211A 1\n", + "008B21-2a 1\n", + "008 B 2I-2H 1\n", + "007c21a 1\n", + "007b21a 1\n", + "007NCOa 1\n", + "007MA20A 1\n", + "007M2OA 1\n", + "007621A 1\n", + "004M20a 1\n", + "0071321A 1\n", + "006c219 1\n", + "006b21A 1\n", + "006b12a 1\n", + "006M208 1\n", + "006B81A 1\n", + "006B218 1\n", + "006B21 1\n", + "005c21A 1\n", + "004MZ0A 1\n", + "004MA20A 1\n", + "016c21a 1\n", + "017B214 1\n", + "03K20A 1\n", + "017b21a 1\n", + "034f21a 1\n", + "033b21a 1\n", + "033H21A 1\n", + "033F21A 1\n", + "033F214 1\n", + "033F 1\n", + "033C1A 1\n", + "0330L20A 1\n", + "032m20a 1\n", + "032b21a 1\n", + "032V20A 1\n", + "0329K20A 1\n", + "0321H20A 1\n", + "031b21a 1\n", + "031a21a 1\n", + "031M20A and 001 1\n", + "#029A21A 1\n", + "031K20A 1\n", + "031I20a 1\n", + "031H21A 1\n", + "031C20A 1\n", + "031821A 1\n", + "030b221a 1\n", + "030b21a 1\n", + "030M20a 1\n", + "03621A 1\n", + "036c21a 1\n", + "037A2113 1\n", + "039B12A 1\n", + "03H20A 1\n", + "03EB21A 1\n", + "03B21A 1\n", + "039f21a 1\n", + "039d21a 1\n", + "039c21a 1\n", + "039b21A 1\n", + "039K2020A 1\n", + "039K20 1\n", + "039K0A 1\n", + "039F21A 1\n", + "039A212A 1\n", + "037B221a 1\n", + "0399K20-2A 1\n", + "039*K20A 1\n", + "038k20A 1\n", + "038KWA 1\n", + "038K208 1\n", + "038A21A/039B21A 1\n", + "037f21a 1\n", + "037b21a 1\n", + "037KZOA 1\n", + "037K209 1\n", + "037F21A 1\n", + "030M2011 1\n", + "030L2OA 1\n", + "030L29A 1\n", + "023m20A 1\n", + "025j20-2a 1\n", + "025az1a 1\n", + "025a21a 1\n", + "025J20a 1\n", + "025J20A 030L20 1\n", + "025J20-JA 1\n", + "025420-2A 1\n", + "02521A 1\n", + "024mzoa 1\n", + "024MZ0A 1\n", + "023m2oa 1\n", + "022c21a 1\n", + "0261721A 1\n", + "022b21a 1\n", + "022N20A 1\n", + "022M2OA 1\n", + "021C12A 1\n", + "021B21A-1 1\n", + "020F21A 1\n", + "019B12A 1\n", + "018b21a 1\n", + "018B2a 1\n", + "018B218 1\n", + "017f21a 1\n", + "025j20a 1\n", + "026A21 1\n", + "030E21A 1\n", + "028L28A 1\n", + "030B21a 1\n", + "030A1A 1\n", + "02SL20A 1\n", + "02A21A 1\n", + "029k20a 1\n", + "029L20A / 024M2 1\n", + "029I20a 1\n", + "029H21B 1\n", + "029AZ1A 1\n", + "029A21P 1\n", + "028l20a 1\n", + "027h21b 1\n", + "026AZ1A 1\n", + "027c21a 1\n", + "027a21a 1\n", + "027LZOA 1\n", + "027L20AModerna 1\n", + "027D21A 1\n", + "027C264 1\n", + "027A 1\n", + "027821A 1\n", + "026l20A 1\n", + "026L204 1\n", + "026B1A 1\n", + "unsure 1\n", + "dtype: int64" + ] + }, + "execution_count": 17, + "metadata": {}, + "output_type": "execute_result" + } + ], "source": [ "# df = df.groupby(['VAX_LOT']).count()\n", "#df2 = df.sort_values(by=['DIED'], ascending=False)\n",