francois/HowBadIsMyBatch
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refactoring

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frankknoll
2022-02-22 23:53:31 +01:00
parent 89c19d4d6d
commit 87a041efa2
1 changed files with 9 additions and 8 deletions
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17
src/HowBadIsMyBatch.ipynb
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@@ -283,13 +283,13 @@
"class BatchCodeTableFactory:\n",
"\n",
" def __init__(self, dataFrame: pd.DataFrame):\n",
" self.dataFrame = DataFrameFilter().filterByCovid19(dataFrame)\n",
" self.companyColumnAdder = CompanyColumnAdder(self.dataFrame)\n",
" self.dataFrame = dataFrame\n",
" self.companyColumnAdder = CompanyColumnAdder(dataFrame)\n",
" self.countryBatchCodeTable = SummationTableFactory.createSummationTable(\n",
" self.dataFrame.groupby(\n",
" dataFrame.groupby(\n",
" [\n",
" self.dataFrame['COUNTRY'],\n",
" self.dataFrame['VAX_LOT']\n",
" dataFrame['COUNTRY'],\n",
" dataFrame['VAX_LOT']\n",
" ]))\n",
"\n",
" def createGlobalBatchCodeTable(self):\n",
@@ -692,7 +692,8 @@
"outputs": [],
"source": [
"internationalVaers = pd.concat([getVaersForYears([2020, 2021, 2022]), getNonDomesticVaers()])\n",
"internationalVaers"
"internationalVaersCovid19 = DataFrameFilter().filterByCovid19(internationalVaers)\n",
"internationalVaersCovid19"
]
},
{
@@ -738,7 +739,7 @@
"metadata": {},
"outputs": [],
"source": [
"countries = sorted(internationalVaers['COUNTRY'].unique())\n",
"countries = sorted(internationalVaersCovid19['COUNTRY'].unique())\n",
"printCountryOptions(countries)"
]
},
@@ -750,7 +751,7 @@
"outputs": [],
"source": [
"minADRsForLethality = 100\n",
"batchCodeTableFactory = BatchCodeTableFactory(internationalVaers)\n",
"batchCodeTableFactory = BatchCodeTableFactory(internationalVaersCovid19)\n",
"\n",
"createAndSaveBatchCodeTablesForCountries(\n",
" createBatchCodeTableForCountry = lambda country: batchCodeTableFactory.createBatchCodeTableByCountry(country),\n",