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refactoring

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This commit is contained in:
frankknoll
2023-08-23 21:44:16 +02:00
parent 3e1c59a697
commit 76e0f6ac80
1 changed files with 12 additions and 11 deletions
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23
src/JensenShannonDistance2BarChartDescriptionColumnAdder.py
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@@ -5,15 +5,16 @@ class JensenShannonDistance2BarChartDescriptionColumnAdder:
@staticmethod @staticmethod
def addJensenShannonDistance2BarChartDescriptionColumn(barChartDescriptionTable): def addJensenShannonDistance2BarChartDescriptionColumn(barChartDescriptionTable):
barChartDescriptionTable['BAR_CHART_DESCRIPTION'] = ( barChartDescriptionTable['BAR_CHART_DESCRIPTION'] = barChartDescriptionTable['BAR_CHART_DESCRIPTION'].map(
barChartDescriptionTable.apply( JensenShannonDistance2BarChartDescriptionColumnAdder._addJensenShannonDistance2BarChartDescription)
lambda barChartDescription:
{
**barChartDescription['BAR_CHART_DESCRIPTION'],
'Jensen-Shannon distance': distance.jensenshannon(
barChartDescription['BAR_CHART_DESCRIPTION']['Adverse Reaction Reports guessed'],
barChartDescription['BAR_CHART_DESCRIPTION']['Adverse Reaction Reports known'],
base=2.0)
},
axis='columns'))
return barChartDescriptionTable return barChartDescriptionTable
@staticmethod
def _addJensenShannonDistance2BarChartDescription(barChartDescription):
return {
**barChartDescription,
'Jensen-Shannon distance': distance.jensenshannon(
barChartDescription['Adverse Reaction Reports guessed'],
barChartDescription['Adverse Reaction Reports known'],
base=2.0)
}