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saving excel files to sub folders

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frankknoll
2022-02-08 17:52:07 +01:00
parent 1076ead83f
commit 69c3522675
1 changed files with 27 additions and 23 deletions
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HowBadIsMyBatch.ipynb
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@@ -884,6 +884,25 @@
"unittest.main(argv = [''], verbosity = 2, exit = False)"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "49f3544e",
"metadata": {},
"outputs": [],
"source": [
"import os\n",
"\n",
"def ensurePath(file):\n",
" directory = os.path.dirname(file)\n",
" if not os.path.exists(directory):\n",
" os.makedirs(directory)\n",
"\n",
"def saveDataFrameAsExcelFile(dataFrame, file):\n",
" ensurePath(file)\n",
" dataFrame.to_excel(file)\n"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -897,7 +916,7 @@
" DataFrameNormalizer.normalize(dataFrame)\n",
" batchCodeTable = BatchCodeTableFactory.createBatchCodeTable(dataFrame, manufacturer = manufacturer, dose = '1')\n",
" display(batchCodeTable)\n",
" batchCodeTable.to_excel(excelFile)"
" saveDataFrameAsExcelFile(batchCodeTable, excelFile)"
]
},
{
@@ -916,7 +935,7 @@
"outputs": [],
"source": [
"# https://www.howbadismybatch.com/moderna.html\n",
"saveBatchCodeTable(\"MODERNA\", \"results/moderna.xlsx\")"
"saveBatchCodeTable(\"MODERNA\", \"results/batchCodes/moderna.xlsx\")"
]
},
{
@@ -935,7 +954,7 @@
"outputs": [],
"source": [
"# https://www.howbadismybatch.com/pfizer.html\n",
"saveBatchCodeTable(\"PFIZER\\BIONTECH\", \"results/pfizer.xlsx\")"
"saveBatchCodeTable(\"PFIZER\\BIONTECH\", \"results/batchCodes/pfizer.xlsx\")"
]
},
{
@@ -954,7 +973,7 @@
"outputs": [],
"source": [
"# https://www.howbadismybatch.com/janssen.html\n",
"saveBatchCodeTable(\"JANSSEN\", \"results/janssen.xlsx\")"
"saveBatchCodeTable(\"JANSSEN\", \"results/batchCodes/janssen.xlsx\")"
]
},
{
@@ -978,7 +997,7 @@
" DataFrameNormalizer.normalize(dataFrame)\n",
" severeEffectsBatchCodeTable = BatchCodeTableFactory.createSevereEffectsBatchCodeTable(dataFrame, dose = '1')\n",
" display(severeEffectsBatchCodeTable)\n",
" severeEffectsBatchCodeTable.to_excel(excelFile)"
" saveDataFrameAsExcelFile(severeEffectsBatchCodeTable, excelFile)"
]
},
{
@@ -1039,7 +1058,7 @@
"outputs": [],
"source": [
"doseByMonthTable = createDoseByMonthTable()\n",
"doseByMonthTable.to_excel('results/doseByMonthTable.xlsx')\n",
"saveDataFrameAsExcelFile(doseByMonthTable, 'results/firstsecond/doseByMonthTable.xlsx')\n",
"doseByMonthTable"
]
},
@@ -1088,25 +1107,10 @@
"source": [
"# FK-TODO: make filter on 'Total reports' a parameter in getInternationalLotTable() \n",
"internationalLotTable = internationalLotTable[internationalLotTable['Total reports'] > 50]\n",
"internationalLotTable.to_excel('results/International_Deadly_Lots.xlsx')\n",
"saveDataFrameAsExcelFile(internationalLotTable, 'results/international/International_Deadly_Lots.xlsx')\n",
"internationalLotTable"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "a35ede95",
"metadata": {},
"outputs": [],
"source": [
"# FK-TODO: jedes zu speichernde Ergebnis in passenden Order speichern\n",
"import os\n",
"\n",
"report_path = 'results/international/'\n",
"if not os.path.exists(report_path):\n",
" os.makedirs(report_path)"
]
},
{
"cell_type": "code",
"execution_count": null,
@@ -1117,7 +1121,7 @@
"for country in ['United Kingdom', 'France', 'Germany', 'Japan', 'Italy', 'Austria', 'Netherlands', 'Spain', 'Belgium', 'Sweden', 'Portugal', 'Australia']:\n",
" batchCodeTable = InternationalLotTableFactory.createBatchCodeTableByCountry(nonDomesticVaers, country)\n",
" batchCodeTable = batchCodeTable[batchCodeTable['Total reports'] > 50]\n",
" batchCodeTable.to_excel(report_path + country + '.xlsx')\n",
" saveDataFrameAsExcelFile(batchCodeTable, 'results/international/' + country + '.xlsx')\n",
" display(country + \":\", batchCodeTable)"
]
}