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deleteEntriesWithADRsLessThanOrEqual from batchCodeTable

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frankknoll
2023-04-17 08:46:12 +02:00
parent 3029ae9831
commit 1ec77c3fe9
2 changed files with 3 additions and 1 deletions
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3
src/BatchCodeTablePersister.py
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@@ -1,7 +1,8 @@
import numpy as np import numpy as np
def createGlobalBatchCodeTable(minADRsForLethality, batchCodeTableFactory): def createGlobalBatchCodeTable(deleteEntriesWithADRsLessThanOrEqual, minADRsForLethality, batchCodeTableFactory):
batchCodeTable = batchCodeTableFactory.createGlobalBatchCodeTable() batchCodeTable = batchCodeTableFactory.createGlobalBatchCodeTable()
batchCodeTable = batchCodeTable[~(batchCodeTable['Adverse Reaction Reports'] <= deleteEntriesWithADRsLessThanOrEqual)]
batchCodeTable.index.set_names("Batch", inplace=True) batchCodeTable.index.set_names("Batch", inplace=True)
if minADRsForLethality is not None: if minADRsForLethality is not None:
batchCodeTable.loc[ batchCodeTable.loc[

1
src/HowBadIsMyBatch.ipynb
View File

@@ -131,6 +131,7 @@
"outputs": [], "outputs": [],
"source": [ "source": [
"batchCodeTable = createGlobalBatchCodeTable(\n", "batchCodeTable = createGlobalBatchCodeTable(\n",
" deleteEntriesWithADRsLessThanOrEqual = 1,\n",
" minADRsForLethality = 100,\n", " minADRsForLethality = 100,\n",
" batchCodeTableFactory = BatchCodeTableFactory(internationalVaersCovid19))\n", " batchCodeTableFactory = BatchCodeTableFactory(internationalVaersCovid19))\n",
"batchCodeTable" "batchCodeTable"